Get the installer from pixi website and install in C:\pixi
In the Edit system enviornment variables , add :
| var | target |
|---|---|
| Path | C:\pixi\bin |
| PIXI_HOME | D:\pixi |
| PIXI_CACHE_DIR | D:\pixi\cache |
D:\pixipixi init env-namea new folder will be created and will contain a pixi.toml file, replace the content of this file with the one of the example below
pixi installInstallation will be done quickly !
[workspace]
authors = ["romainGuiet <romain.guiet@epfl.ch>"]
channels = ["conda-forge"]
name = "pytorch-conda-forge"
platforms = ["linux-64", "win-64"]
[system-requirements]
cuda = "12.0"
[dependencies]
pytorch-gpu = "*"
[workspace]
authors = ["romainGuiet <romain.guiet@epfl.ch>"]
channels = ["conda-forge"]
name = "cellpose-3111-gpu"
platforms = ["linux-64", "win-64"]
version = "3.1.1.1"
[tasks]
[system-requirements]
cuda = "12.0"
[dependencies]
pytorch-gpu = "*"
cellpose = ">=3.1.1.1,<4"
[workspace]
authors = ["romainGuiet <romain.guiet@epfl.ch>"]
channels = ["conda-forge"]
name = "cellpose-406-gpu"
platforms = ["win-64"]
version = "4.0.6"
[tasks]
[system-requirements]
cuda = "12.0"
[dependencies]
pytorch-gpu = "*"
cellpose = ">=4.0.6,<5"
[workspace]
authors = ["romainGuiet <romain.guiet@epfl.ch>"]
channels = ["ome" , "conda-forge"]
name = "cotcotcot"
platforms = ["win-64"]
version = "0.1.0"
[system-requirements]
cuda = "12.0"
[dependencies]
pytorch-gpu = "*"
zeroc-ice36-python = "*"
omero-py = "*"
ipykernel = "*"
notebook = "*"
napari = "*"
pyqt = "*"
napari-ome-zarr = "*"
ome-zarr = "*"
napari-omero = "*"
pillow = "*"
matplotlib = "*"
imageio = "*"
tifffile = "*"
[pypi-dependencies]
cotracker = { git = "https://github.com/facebookresearch/co-tracker.git"}
napari-cotcotcot = { git = "https://github.com/BIOP/napari-cotcotcot.git"}
opencv-python = "*"