Install the latest version of QuPath from https://qupath.github.io/
The BIOP uses QuPath extensively and thus an installation with many extra plugins is provided.
QuPath Common Data
folder fromWin :
\\sv-nas1.rcp.epfl.ch\ptbiop-raw\public\0-Software\QuPath
MacOS :
smb://sv-nas1.rcp.epfl.ch/ptbiop-raw/public/0-Software/QuPath
Paste the QuPath Common Data
folder somewhere permanent on your computer. We recommend your C:\
drive directly or your Documents
folder on Mac
From QuPath, go to Edit > Preferences...
Under Extensions > QuPath user directory
double click to QuPath Common Data
Restart QuPath
To see it it worked, go to Extensions > Installed Extensions
and locate BIOP QuPath Extension
Warning: In step 4, point it to the
QuPath Comon Data folder
and not theextensions
folder inside